The Metagenomics bioinformatics at MGnify, which focused on the tools, processes, and analysis approaches used by MGnify in the field of genome-resolved metagenomics ran in September 2024. Here, we have made the course materials available for you to access any time.

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Using these materials

These course materials provide a mixture of pre-recorded lectures, presentations and practicals to help advance your knowledge and skills in the analysis of biological data. You may select your topic of interest from the Course content page to view the relevant materials or work your way through all the course materials. 

To find out more about the trainers who created these materials, follow the links from the Course content page or go directly to the Trainer biographies page.

In the Further learning section you may explore the details about the EMBL-EBI’s free access online tutorials and webinars on a variety of life sciences topics.

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Learning outcomes

After the course you should be able to:

• Conduct appropriate quality control and decontamination of metagenomic data and run simple assembly pipelines on short-read data
• Utilise public datasets and resources such as MGnify to identify relevant data for analysis
• Apply relevant tools in the analysis of metagenomic data
• Submit metagenomic data to online repositories for sharing and future analysis
• Apply knowledge in downstream functional and taxonomic analysis

Material collection editors

• Patricia Carvajal Lopez, EMBL-EBI
• Tatiana Gurbich, EMBL-EBI
• Lorna Richardson, EMBL-EBI
• Alexander Rogers, EMBL-EBI

DOI: 10.6019/TOL.MetagenomicsMgnify-t.2023.00001.1